WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00198356 Gene Name  F45B8.13
Sequence Name  ? F45B8.13 Organism  Caenorhabditis elegans
Automated Description  Is affected by alh-4 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 349
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00198356

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45B8.13 F45B8.13 349   X: 14954883-14955231
 

Other

0 CDSs

0 RNAi Result

15 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810
gk963581
gk740486
gk776867
gk317865
gk350052
gk918847
gk302271
gk302270
gk302269
gk302268

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00198356 14954883 14955231 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_14955232..14955306   75 X: 14955232-14955306 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in alh-4(hj221) deletion allele comparing to in N2. N.A. WBPaper00061653:alh-4(hj221)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00198356 14954883 14955231 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
349

1 Sequence Ontology Term