WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D1.3.1 Sequence Name  F20D1.3.1
Length (nt)  1555   Chromosome Location  X: 14976117-14978716
Chromosome . Primary Identifier  X Chromosome Location . Start  14976117
Chromosome Location . End  14978716 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008975 F20D1.3 F20D1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D1.3 F20D1.3 1392   X: 14976118-14976376

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20D1.3.1 14976117 14978716 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261367   260   X: 14976117-14976376 Caenorhabditis elegans
Exon261368   254   X: 14976430-14976683 Caenorhabditis elegans
Exon261372   192   X: 14977528-14977719 Caenorhabditis elegans
Exon261373   82   X: 14977766-14977847 Caenorhabditis elegans
Exon261374   396   X: 14977905-14978300 Caenorhabditis elegans
Exon261375   371   X: 14978346-14978716 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20D1.3.1 14976117 14978716 1

1 Sequence

Length
1555

1 Sequence Ontology Term

Identifier Name Description
transcript