WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D1.6.1 Sequence Name  F20D1.6.1
Length (nt)  2909   Chromosome Location  X: 14983533-14987365
Chromosome . Primary Identifier  X Chromosome Location . Start  14983533
Chromosome Location . End  14987365 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004317 rbg-1 F20D1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D1.6 F20D1.6 2748   X: 14983561-14983695

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20D1.6.1 14983533 14987365 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261384   163   X: 14983533-14983695 Caenorhabditis elegans
Exon261385   90   X: 14983754-14983843 Caenorhabditis elegans
Exon261386   153   X: 14983920-14984072 Caenorhabditis elegans
Exon261387   119   X: 14984121-14984239 Caenorhabditis elegans
Exon261388   91   X: 14984286-14984376 Caenorhabditis elegans
Exon261389   141   X: 14984444-14984584 Caenorhabditis elegans
Exon261390   83   X: 14984634-14984716 Caenorhabditis elegans
Exon261391   149   X: 14984772-14984920 Caenorhabditis elegans
Exon261392   203   X: 14984968-14985170 Caenorhabditis elegans
Exon261393   359   X: 14985228-14985586 Caenorhabditis elegans
Exon261394   131   X: 14985634-14985764 Caenorhabditis elegans
Exon261395   452   X: 14985812-14986263 Caenorhabditis elegans
Exon261396   276   X: 14986476-14986751 Caenorhabditis elegans
Exon261397   212   X: 14986809-14987020 Caenorhabditis elegans
Exon261398   287   X: 14987079-14987365 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20D1.6.1 14983533 14987365 1

1 Sequence

Length
2909

1 Sequence Ontology Term

Identifier Name Description
transcript