WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D1.7.1 Sequence Name  F20D1.7.1
Length (nt)  2247   Chromosome Location  X: 14987365-14991380
Chromosome . Primary Identifier  X Chromosome Location . Start  14987365
Chromosome Location . End  14991380 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D1.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008977 iglr-1 F20D1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D1.7 F20D1.7 2088   X: 14987462-14987494

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20D1.7.1 14987365 14991380 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261399   130   X: 14987365-14987494 Caenorhabditis elegans
Exon261400   175   X: 14987551-14987725 Caenorhabditis elegans
Exon261401   246   X: 14987784-14988029 Caenorhabditis elegans
Exon261402   480   X: 14988659-14989138 Caenorhabditis elegans
Exon261403   189   X: 14989189-14989377 Caenorhabditis elegans
Exon261404   395   X: 14989604-14989998 Caenorhabditis elegans
Exon261405   81   X: 14990561-14990641 Caenorhabditis elegans
Exon261406   138   X: 14990690-14990827 Caenorhabditis elegans
Exon261407   109   X: 14990878-14990986 Caenorhabditis elegans
Exon261408   154   X: 14991029-14991182 Caenorhabditis elegans
Exon261409   150   X: 14991231-14991380 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20D1.7.1 14987365 14991380 -1

1 Sequence

Length
2247

1 Sequence Ontology Term

Identifier Name Description
transcript