WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D1.8.1 Sequence Name  F20D1.8.1
Length (nt)  1626   Chromosome Location  X: 14994752-14999201
Chromosome . Primary Identifier  X Chromosome Location . Start  14994752
Chromosome Location . End  14999201 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D1.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008978 cutl-3 F20D1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D1.8 F20D1.8 1218   X: 14994943-14995127

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20D1.8.1 14994752 14999201 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261412   376   X: 14994752-14995127 Caenorhabditis elegans
Exon261413   202   X: 14995191-14995392 Caenorhabditis elegans
Exon261415   158   X: 14996214-14996371 Caenorhabditis elegans
Exon261416   152   X: 14996529-14996680 Caenorhabditis elegans
Exon261417   108   X: 14996842-14996949 Caenorhabditis elegans
Exon261418   143   X: 14996999-14997141 Caenorhabditis elegans
Exon261422   91   X: 14998003-14998093 Caenorhabditis elegans
Exon261423   97   X: 14998711-14998807 Caenorhabditis elegans
Exon261424   46   X: 14998852-14998897 Caenorhabditis elegans
Exon261425   253   X: 14998949-14999201 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20D1.8.1 14994752 14999201 -1

1 Sequence

Length
1626

1 Sequence Ontology Term

Identifier Name Description
transcript