WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18B12.2.1 Sequence Name  C18B12.2.1
Length (nt)  1786   Chromosome Location  X: 15026308-15031202
Chromosome . Primary Identifier  X Chromosome Location . Start  15026308
Chromosome Location . End  15031202 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18B12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007664 seb-3 C18B12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18B12.2 C18B12.2 1365   X: 15026322-15026398

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18B12.2.1 15026308 15031202 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261446   91   X: 15026308-15026398 Caenorhabditis elegans
Exon261447   122   X: 15026705-15026826 Caenorhabditis elegans
Exon261449   119   X: 15028283-15028401 Caenorhabditis elegans
Exon261450   114   X: 15028449-15028562 Caenorhabditis elegans
Exon261451   141   X: 15028620-15028760 Caenorhabditis elegans
Exon261452   303   X: 15029332-15029634 Caenorhabditis elegans
Exon261453   86   X: 15029683-15029768 Caenorhabditis elegans
Exon261454   127   X: 15030102-15030228 Caenorhabditis elegans
Exon261455   95   X: 15030277-15030371 Caenorhabditis elegans
Exon261456   136   X: 15030420-15030555 Caenorhabditis elegans
Exon261457   452   X: 15030751-15031202 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18B12.2.1 15026308 15031202 1

1 Sequence

Length
1786

1 Sequence Ontology Term

Identifier Name Description
transcript