WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A10.1e.1 Sequence Name  F08A10.1e.1
Length (nt)  2010   Chromosome Location  I: 8196060-8208486
Chromosome . Primary Identifier  I Chromosome Location . Start  8196060
Chromosome Location . End  8208486 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A10.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008570 kcnl-2 F08A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A10.1e F08A10.1e 2010   I: 8196060-8196137

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1e.1 8196060 8208486 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21212   78   I: 8196060-8196137 Caenorhabditis elegans
Exon21216   112   I: 8196208-8196319 Caenorhabditis elegans
Exon21225   83   I: 8196540-8196622 Caenorhabditis elegans
Exon21232   102   I: 8199038-8199139 Caenorhabditis elegans
Exon21235   81   I: 8199617-8199697 Caenorhabditis elegans
Exon21246   139   I: 8199817-8199955 Caenorhabditis elegans
Exon21257   127   I: 8206272-8206398 Caenorhabditis elegans
Exon21268   89   I: 8206456-8206544 Caenorhabditis elegans
Exon21279   146   I: 8206594-8206739 Caenorhabditis elegans
Exon21290   239   I: 8206835-8207073 Caenorhabditis elegans
Exon21301   427   I: 8207119-8207545 Caenorhabditis elegans
Exon21312   128   I: 8207603-8207730 Caenorhabditis elegans
Exon21323   70   I: 8207781-8207850 Caenorhabditis elegans
Exon21337   156   I: 8207895-8208050 Caenorhabditis elegans
Exon21342   33   I: 8208454-8208486 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1e.1 8196060 8208486 1

1 Sequence

Length
2010

1 Sequence Ontology Term

Identifier Name Description
transcript