WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08A10.1i.1 Sequence Name  F08A10.1i.1
Length (nt)  1959   Chromosome Location  I: 8196060-8208557
Chromosome . Primary Identifier  I Chromosome Location . Start  8196060
Chromosome Location . End  8208557 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08A10.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008570 kcnl-2 F08A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08A10.1i F08A10.1i 1959   I: 8196060-8196137

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1i.1 8196060 8208557 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21213   78   I: 8196060-8196137 Caenorhabditis elegans
Exon21220   112   I: 8196208-8196319 Caenorhabditis elegans
Exon21229   83   I: 8196540-8196622 Caenorhabditis elegans
Exon21239   81   I: 8199617-8199697 Caenorhabditis elegans
Exon21250   139   I: 8199817-8199955 Caenorhabditis elegans
Exon21261   127   I: 8206272-8206398 Caenorhabditis elegans
Exon21272   89   I: 8206456-8206544 Caenorhabditis elegans
Exon21283   146   I: 8206594-8206739 Caenorhabditis elegans
Exon21294   239   I: 8206835-8207073 Caenorhabditis elegans
Exon21305   427   I: 8207119-8207545 Caenorhabditis elegans
Exon21316   128   I: 8207603-8207730 Caenorhabditis elegans
Exon21327   70   I: 8207781-8207850 Caenorhabditis elegans
Exon21331   136   I: 8207895-8208030 Caenorhabditis elegans
Exon21344   104   I: 8208454-8208557 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08A10.1i.1 8196060 8208557 1

1 Sequence

Length
1959

1 Sequence Ontology Term

Identifier Name Description
transcript