WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09B12.3.1 Sequence Name  F09B12.3.1
Length (nt)  1839   Chromosome Location  X: 15095343-15097954
Chromosome . Primary Identifier  X Chromosome Location . Start  15095343
Chromosome Location . End  15097954 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09B12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008607 F09B12.3 F09B12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09B12.3 F09B12.3 1749   X: 15095433-15095519

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09B12.3.1 15095343 15097954 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261619   177   X: 15095343-15095519 Caenorhabditis elegans
Exon261620   99   X: 15095676-15095774 Caenorhabditis elegans
Exon261621   385   X: 15095819-15096203 Caenorhabditis elegans
Exon261622   257   X: 15096247-15096503 Caenorhabditis elegans
Exon261623   95   X: 15096548-15096642 Caenorhabditis elegans
Exon261624   545   X: 15096692-15097236 Caenorhabditis elegans
Exon261625   61   X: 15097556-15097616 Caenorhabditis elegans
Exon261626   117   X: 15097665-15097781 Caenorhabditis elegans
Exon261627   103   X: 15097852-15097954 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09B12.3.1 15095343 15097954 -1

1 Sequence

Length
1839

1 Sequence Ontology Term

Identifier Name Description
transcript