WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09B12.2.1 Sequence Name  F09B12.2.1
Length (nt)  1024   Chromosome Location  X: 15098066-15100419
Chromosome . Primary Identifier  X Chromosome Location . Start  15098066
Chromosome Location . End  15100419 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09B12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008606 dhhc-1 F09B12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09B12.2 F09B12.2 888   X: 15098188-15098352

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09B12.2.1 15098066 15100419 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261628   287   X: 15098066-15098352 Caenorhabditis elegans
Exon261629   286   X: 15098841-15099126 Caenorhabditis elegans
Exon261630   76   X: 15099363-15099438 Caenorhabditis elegans
Exon261631   53   X: 15099495-15099547 Caenorhabditis elegans
Exon261632   224   X: 15099622-15099845 Caenorhabditis elegans
Exon261633   98   X: 15100322-15100419 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09B12.2.1 15098066 15100419 -1

1 Sequence

Length
1024

1 Sequence Ontology Term

Identifier Name Description
transcript