WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09B12.1a.1 Sequence Name  F09B12.1a.1
Length (nt)  2092   Chromosome Location  X: 15101786-15107797
Chromosome . Primary Identifier  X Chromosome Location . Start  15101786
Chromosome Location . End  15107797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09B12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008605 mlt-9 F09B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09B12.1a F09B12.1a 1722   X: 15102100-15102210

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09B12.1a.1 15101786 15107797 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261634   425   X: 15101786-15102210 Caenorhabditis elegans
Exon261636   365   X: 15102266-15102630 Caenorhabditis elegans
Exon261638   98   X: 15102676-15102773 Caenorhabditis elegans
Exon261640   425   X: 15103019-15103443 Caenorhabditis elegans
Exon261642   266   X: 15103519-15103784 Caenorhabditis elegans
Exon261644   135   X: 15104439-15104573 Caenorhabditis elegans
Exon261646   81   X: 15104920-15105000 Caenorhabditis elegans
Exon261649   133   X: 15105871-15106003 Caenorhabditis elegans
Exon261650   71   X: 15106322-15106392 Caenorhabditis elegans
Exon261653   93   X: 15107705-15107797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09B12.1a.1 15101786 15107797 -1

1 Sequence

Length
2092

1 Sequence Ontology Term

Identifier Name Description
transcript