WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09B12.1b.1 Sequence Name  F09B12.1b.1
Length (nt)  2028   Chromosome Location  X: 15101792-15107769
Chromosome . Primary Identifier  X Chromosome Location . Start  15101792
Chromosome Location . End  15107769 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09B12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008605 mlt-9 F09B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09B12.1b F09B12.1b 1692   X: 15102100-15102210

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09B12.1b.1 15101792 15107769 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261635   419   X: 15101792-15102210 Caenorhabditis elegans
Exon261637   365   X: 15102266-15102630 Caenorhabditis elegans
Exon261639   98   X: 15102676-15102773 Caenorhabditis elegans
Exon261641   425   X: 15103019-15103443 Caenorhabditis elegans
Exon261643   266   X: 15103519-15103784 Caenorhabditis elegans
Exon261645   135   X: 15104439-15104573 Caenorhabditis elegans
Exon261647   81   X: 15104920-15105000 Caenorhabditis elegans
Exon261648   103   X: 15105871-15105973 Caenorhabditis elegans
Exon261651   71   X: 15106322-15106392 Caenorhabditis elegans
Exon261652   65   X: 15107705-15107769 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09B12.1b.1 15101792 15107769 -1

1 Sequence

Length
2028

1 Sequence Ontology Term

Identifier Name Description
transcript