WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02E1.2.2 Sequence Name  T02E1.2.2
Length (nt)  2159   Chromosome Location  I: 8219998-8223954
Chromosome . Primary Identifier  I Chromosome Location . Start  8219998
Chromosome Location . End  8223954 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02E1.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011375 T02E1.2 T02E1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02E1.2 T02E1.2 1707   I: 8220314-8220397

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T02E1.2.2 8219998 8223954 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21409   400   I: 8219998-8220397 Caenorhabditis elegans
Exon21412   282   I: 8220493-8220774 Caenorhabditis elegans
Exon21414   229   I: 8221146-8221374 Caenorhabditis elegans
Exon21416   177   I: 8221435-8221611 Caenorhabditis elegans
Exon21418   201   I: 8221660-8221860 Caenorhabditis elegans
Exon21420   181   I: 8221970-8222150 Caenorhabditis elegans
Exon21422   89   I: 8222234-8222322 Caenorhabditis elegans
Exon21424   189   I: 8222396-8222584 Caenorhabditis elegans
Exon21426   80   I: 8222635-8222714 Caenorhabditis elegans
Exon21428   60   I: 8222763-8222822 Caenorhabditis elegans
Exon21430   143   I: 8222867-8223009 Caenorhabditis elegans
Exon21431   128   I: 8223827-8223954 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T02E1.2.2 8219998 8223954 -1

1 Sequence

Length
2159

1 Sequence Ontology Term

Identifier Name Description
transcript