WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07D5.1i.1 Sequence Name  R07D5.1i.1
Length (nt)  2792   Chromosome Location  X: 15120846-15132200
Chromosome . Primary Identifier  X Chromosome Location . Start  15120846
Chromosome Location . End  15132200 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07D5.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006747 unc-7 R07D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07D5.1i R07D5.1i 1425   X: 15121822-15121970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1i.1 15120846 15132200 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261700   1125   X: 15120846-15121970 Caenorhabditis elegans
Exon261720   112   X: 15122604-15122715 Caenorhabditis elegans
Exon261731   168   X: 15122871-15123038 Caenorhabditis elegans
Exon261742   279   X: 15123085-15123363 Caenorhabditis elegans
Exon261753   107   X: 15123420-15123526 Caenorhabditis elegans
Exon261764   288   X: 15124586-15124873 Caenorhabditis elegans
Exon261775   138   X: 15124919-15125056 Caenorhabditis elegans
Exon261786   76   X: 15125112-15125187 Caenorhabditis elegans
Exon261798   51   X: 15127125-15127175 Caenorhabditis elegans
Exon261807   448   X: 15131753-15132200 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1i.1 15120846 15132200 -1

1 Sequence

Length
2792

1 Sequence Ontology Term

Identifier Name Description
transcript