WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07D5.1g.1 Sequence Name  R07D5.1g.1
Length (nt)  2415   Chromosome Location  X: 15120871-15134673
Chromosome . Primary Identifier  X Chromosome Location . Start  15120871
Chromosome Location . End  15134673 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07D5.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006747 unc-7 R07D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07D5.1g R07D5.1g 1386   X: 15121822-15121970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1g.1 15120871 15134673 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261704   1100   X: 15120871-15121970 Caenorhabditis elegans
Exon261718   112   X: 15122604-15122715 Caenorhabditis elegans
Exon261729   168   X: 15122871-15123038 Caenorhabditis elegans
Exon261740   279   X: 15123085-15123363 Caenorhabditis elegans
Exon261752   107   X: 15123420-15123526 Caenorhabditis elegans
Exon261762   288   X: 15124586-15124873 Caenorhabditis elegans
Exon261773   138   X: 15124919-15125056 Caenorhabditis elegans
Exon261784   76   X: 15125112-15125187 Caenorhabditis elegans
Exon261796   51   X: 15127125-15127175 Caenorhabditis elegans
Exon261809   96   X: 15134578-15134673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1g.1 15120871 15134673 -1

1 Sequence

Length
2415

1 Sequence Ontology Term

Identifier Name Description
transcript