WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01G9.2b.1 Sequence Name  T01G9.2b.1
Length (nt)  1494   Chromosome Location  I: 8275665-8288124
Chromosome . Primary Identifier  I Chromosome Location . Start  8275665
Chromosome Location . End  8288124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G9.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011344 T01G9.2 T01G9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01G9.2b T01G9.2b 1260   I: 8275883-8276068

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01G9.2b.1 8275665 8288124 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21549   404   I: 8275665-8276068 Caenorhabditis elegans
Exon21552   67   I: 8276466-8276532 Caenorhabditis elegans
Exon21554   83   I: 8276871-8276953 Caenorhabditis elegans
Exon21562   76   I: 8286053-8286128 Caenorhabditis elegans
Exon21564   62   I: 8286593-8286654 Caenorhabditis elegans
Exon21566   74   I: 8286703-8286776 Caenorhabditis elegans
Exon21568   113   I: 8286822-8286934 Caenorhabditis elegans
Exon21570   104   I: 8286980-8287083 Caenorhabditis elegans
Exon21572   175   I: 8287280-8287454 Caenorhabditis elegans
Exon21574   128   I: 8287686-8287813 Caenorhabditis elegans
Exon21575   132   I: 8287864-8287995 Caenorhabditis elegans
Exon21578   76   I: 8288049-8288124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01G9.2b.1 8275665 8288124 -1

1 Sequence

Length
1494

1 Sequence Ontology Term

Identifier Name Description
transcript