WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10B10.2.1 Sequence Name  T10B10.2.1
Length (nt)  1438   Chromosome Location  X: 15173904-15178145
Chromosome . Primary Identifier  X Chromosome Location . Start  15173904
Chromosome Location . End  15178145 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10B10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011679 ucr-2.2 T10B10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10B10.2 T10B10.2 1269   X: 15173905-15174039

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10B10.2.1 15173904 15178145 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261830   136   X: 15173904-15174039 Caenorhabditis elegans
Exon261831   147   X: 15174089-15174235 Caenorhabditis elegans
Exon261832   212   X: 15174498-15174709 Caenorhabditis elegans
Exon261833   82   X: 15174763-15174844 Caenorhabditis elegans
Exon261834   135   X: 15174892-15175026 Caenorhabditis elegans
Exon261837   140   X: 15176853-15176992 Caenorhabditis elegans
Exon261838   191   X: 15177044-15177234 Caenorhabditis elegans
Exon261839   395   X: 15177751-15178145 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10B10.2.1 15173904 15178145 1

1 Sequence

Length
1438

1 Sequence Ontology Term

Identifier Name Description
transcript