WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10B10.3b.1 Sequence Name  T10B10.3b.1
Length (nt)  2752   Chromosome Location  X: 15178152-15181460
Chromosome . Primary Identifier  X Chromosome Location . Start  15178152
Chromosome Location . End  15181460 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10B10.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011680 pkhm-2 T10B10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10B10.3b T10B10.3b 2232   X: 15178667-15178729

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10B10.3b.1 15178152 15181460 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261841   578   X: 15178152-15178729 Caenorhabditis elegans
Exon261843   469   X: 15178776-15179244 Caenorhabditis elegans
Exon261845   491   X: 15179311-15179801 Caenorhabditis elegans
Exon261847   274   X: 15179930-15180203 Caenorhabditis elegans
Exon261849   449   X: 15180245-15180693 Caenorhabditis elegans
Exon261851   112   X: 15180797-15180908 Caenorhabditis elegans
Exon261853   189   X: 15180956-15181144 Caenorhabditis elegans
Exon261855   86   X: 15181193-15181278 Caenorhabditis elegans
Exon261856   104   X: 15181357-15181460 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10B10.3b.1 15178152 15181460 -1

1 Sequence

Length
2752

1 Sequence Ontology Term

Identifier Name Description
transcript