WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Hide

Oops!

http://intermine.wormbase.org/tools/wormmine/service/ is incorrect

CDS :

WormMine ID  CDS:F52B5.1a Sequence Name  F52B5.1a
Length (nt)  3360   Chromosome Location  I: 8297294-8297404
Chromosome . Primary Identifier  I Chromosome Location . Start  8297294
Chromosome Location . End  8297404
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27167 ABTS-1, isoform a 124.6 1119 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00082244
WBRNAi00047920
WBRNAi00003734
WBRNAi00116959
WBRNAi00082243
WBRNAi00082242

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52B5.1a 8297294 8297404 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009920 abts-1 F52B5.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52B5.1a 8297294 8297404 -1
CDS:F52B5.1a 8297744 8298055 -1
CDS:F52B5.1a 8298144 8298275 -1
CDS:F52B5.1a 8298536 8299195 -1
CDS:F52B5.1a 8299499 8299863 -1
CDS:F52B5.1a 8300337 8301483 -1
CDS:F52B5.1a 8301845 8302033 -1
CDS:F52B5.1a 8303643 8303746 -1
CDS:F52B5.1a 8304115 8304381 -1
CDS:F52B5.1a 8306224 8306282 -1
CDS:F52B5.1a 8307503 8307516 -1

1 Sequence

Length
3360

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52B5.1a.1 F52B5.1a.1 3780   I: 8296924-8307566