WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52B5.3.1 Sequence Name  F52B5.3.1
Length (nt)  4509   Chromosome Location  I: 8318347-8323987
Chromosome . Primary Identifier  I Chromosome Location . Start  8318347
Chromosome Location . End  8323987 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009922 F52B5.3 F52B5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52B5.3 F52B5.3 4278   I: 8318574-8318639

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.3.1 8318347 8323987 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21658   293   I: 8318347-8318639 Caenorhabditis elegans
Exon21659   612   I: 8318772-8319383 Caenorhabditis elegans
Exon21660   105   I: 8319430-8319534 Caenorhabditis elegans
Exon21661   110   I: 8319581-8319690 Caenorhabditis elegans
Exon21662   236   I: 8319738-8319973 Caenorhabditis elegans
Exon21663   397   I: 8320184-8320580 Caenorhabditis elegans
Exon21664   637   I: 8320627-8321263 Caenorhabditis elegans
Exon21665   126   I: 8321489-8321614 Caenorhabditis elegans
Exon21666   297   I: 8321659-8321955 Caenorhabditis elegans
Exon21667   376   I: 8322039-8322414 Caenorhabditis elegans
Exon21668   510   I: 8322468-8322977 Caenorhabditis elegans
Exon21669   273   I: 8323034-8323306 Caenorhabditis elegans
Exon21670   468   I: 8323357-8323824 Caenorhabditis elegans
Exon21671   69   I: 8323919-8323987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.3.1 8318347 8323987 -1

1 Sequence

Length
4509

1 Sequence Ontology Term

Identifier Name Description
transcript