WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H03A11.2.1 Sequence Name  H03A11.2.1
Length (nt)  4056   Chromosome Location  X: 15225869-15230645
Chromosome . Primary Identifier  X Chromosome Location . Start  15225869
Chromosome Location . End  15230645 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H03A11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010357 H03A11.2 H03A11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H03A11.2 H03A11.2 3657   X: 15226244-15226429

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H03A11.2.1 15225869 15230645 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261917   561   X: 15225869-15226429 Caenorhabditis elegans
Exon261918   107   X: 15226479-15226585 Caenorhabditis elegans
Exon261919   2764   X: 15226655-15229418 Caenorhabditis elegans
Exon261920   249   X: 15229463-15229711 Caenorhabditis elegans
Exon261921   65   X: 15229888-15229952 Caenorhabditis elegans
Exon261922   151   X: 15229997-15230147 Caenorhabditis elegans
Exon261923   91   X: 15230438-15230528 Caenorhabditis elegans
Exon261924   68   X: 15230578-15230645 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H03A11.2.1 15225869 15230645 -1

1 Sequence

Length
4056

1 Sequence Ontology Term

Identifier Name Description
transcript