WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16D3.6.1 Sequence Name  F16D3.6.1
Length (nt)  1069   Chromosome Location  I: 8375490-8377578
Chromosome . Primary Identifier  I Chromosome Location . Start  8375490
Chromosome Location . End  8377578 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16D3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008889 F16D3.6 F16D3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16D3.6 F16D3.6 1026   I: 8375490-8375717

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16D3.6.1 8375490 8377578 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21807   228   I: 8375490-8375717 Caenorhabditis elegans
Exon21808   180   I: 8375874-8376053 Caenorhabditis elegans
Exon21809   96   I: 8376172-8376267 Caenorhabditis elegans
Exon21810   96   I: 8376379-8376474 Caenorhabditis elegans
Exon21811   79   I: 8376590-8376668 Caenorhabditis elegans
Exon21812   108   I: 8376734-8376841 Caenorhabditis elegans
Exon21813   282   I: 8377297-8377578 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16D3.6.1 8375490 8377578 1

1 Sequence

Length
1069

1 Sequence Ontology Term

Identifier Name Description
transcript