WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19A6.1b.1 Sequence Name  T19A6.1b.1
Length (nt)  1767   Chromosome Location  I: 8377599-8392758
Chromosome . Primary Identifier  I Chromosome Location . Start  8377599
Chromosome Location . End  8392758 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19A6.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011827 T19A6.1 T19A6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19A6.1b T19A6.1b 900   I: 8378305-8378427

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19A6.1b.1 8377599 8392758 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21815   829   I: 8377599-8378427 Caenorhabditis elegans
Exon21818   103   I: 8379137-8379239 Caenorhabditis elegans
Exon21821   110   I: 8379706-8379815 Caenorhabditis elegans
Exon21824   116   I: 8380330-8380445 Caenorhabditis elegans
Exon21826   75   I: 8380911-8380985 Caenorhabditis elegans
Exon21837   65   I: 8388028-8388092 Caenorhabditis elegans
Exon21840   69   I: 8388141-8388209 Caenorhabditis elegans
Exon21843   124   I: 8388786-8388909 Caenorhabditis elegans
Exon21846   112   I: 8389916-8390027 Caenorhabditis elegans
Exon21851   164   I: 8392595-8392758 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19A6.1b.1 8377599 8392758 -1

1 Sequence

Length
1767

1 Sequence Ontology Term

Identifier Name Description
transcript