WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02D4.1.1 Sequence Name  C02D4.1.1
Length (nt)  1281   Chromosome Location  X: 15284115-15286484
Chromosome . Primary Identifier  X Chromosome Location . Start  15284115
Chromosome Location . End  15286484 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02D4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007262 jud-4 C02D4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02D4.1 C02D4.1 819   X: 15284320-15284370

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02D4.1.1 15284115 15286484 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262036   256   X: 15284115-15284370 Caenorhabditis elegans
Exon262037   86   X: 15284418-15284503 Caenorhabditis elegans
Exon262038   86   X: 15284837-15284922 Caenorhabditis elegans
Exon262039   83   X: 15284969-15285051 Caenorhabditis elegans
Exon262040   108   X: 15285103-15285210 Caenorhabditis elegans
Exon262041   144   X: 15285259-15285402 Caenorhabditis elegans
Exon262042   87   X: 15285448-15285534 Caenorhabditis elegans
Exon262043   73   X: 15286009-15286081 Caenorhabditis elegans
Exon262044   358   X: 15286127-15286484 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02D4.1.1 15284115 15286484 1

1 Sequence

Length
1281

1 Sequence Ontology Term

Identifier Name Description
transcript