WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02E9.4a.1 Sequence Name  F02E9.4a.1
Length (nt)  4720   Chromosome Location  I: 8416816-8425051
Chromosome . Primary Identifier  I Chromosome Location . Start  8416816
Chromosome Location . End  8425051 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004117 sin-3 F02E9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02E9.4a F02E9.4a 4518   I: 8416832-8417506

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02E9.4a.1 8416816 8425051 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21921   691   I: 8416816-8417506 Caenorhabditis elegans
Exon21923   287   I: 8417895-8418181 Caenorhabditis elegans
Exon21925   157   I: 8418451-8418607 Caenorhabditis elegans
Exon21927   303   I: 8418720-8419022 Caenorhabditis elegans
Exon21929   435   I: 8419422-8419856 Caenorhabditis elegans
Exon21931   135   I: 8420348-8420482 Caenorhabditis elegans
Exon21933   99   I: 8420529-8420627 Caenorhabditis elegans
Exon21935   393   I: 8420954-8421346 Caenorhabditis elegans
Exon21937   120   I: 8421397-8421516 Caenorhabditis elegans
Exon21939   101   I: 8421585-8421685 Caenorhabditis elegans
Exon21941   189   I: 8421879-8422067 Caenorhabditis elegans
Exon21943   144   I: 8422116-8422259 Caenorhabditis elegans
Exon21945   150   I: 8422658-8422807 Caenorhabditis elegans
Exon21948   87   I: 8422860-8422946 Caenorhabditis elegans
Exon21949   262   I: 8422996-8423257 Caenorhabditis elegans
Exon21951   114   I: 8423540-8423653 Caenorhabditis elegans
Exon21953   399   I: 8423702-8424100 Caenorhabditis elegans
Exon21955   129   I: 8424159-8424287 Caenorhabditis elegans
Exon21957   222   I: 8424485-8424706 Caenorhabditis elegans
Exon21960   303   I: 8424749-8425051 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02E9.4a.1 8416816 8425051 1

1 Sequence

Length
4720

1 Sequence Ontology Term

Identifier Name Description
transcript