WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02E9.4b.1 Sequence Name  F02E9.4b.1
Length (nt)  4699   Chromosome Location  I: 8416831-8425039
Chromosome . Primary Identifier  I Chromosome Location . Start  8416831
Chromosome Location . End  8425039 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E9.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004117 sin-3 F02E9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02E9.4b F02E9.4b 4524   I: 8416832-8417506

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02E9.4b.1 8416831 8425039 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21922   676   I: 8416831-8417506 Caenorhabditis elegans
Exon21924   287   I: 8417895-8418181 Caenorhabditis elegans
Exon21926   157   I: 8418451-8418607 Caenorhabditis elegans
Exon21928   303   I: 8418720-8419022 Caenorhabditis elegans
Exon21930   435   I: 8419422-8419856 Caenorhabditis elegans
Exon21932   135   I: 8420348-8420482 Caenorhabditis elegans
Exon21934   99   I: 8420529-8420627 Caenorhabditis elegans
Exon21936   393   I: 8420954-8421346 Caenorhabditis elegans
Exon21938   120   I: 8421397-8421516 Caenorhabditis elegans
Exon21940   101   I: 8421585-8421685 Caenorhabditis elegans
Exon21942   189   I: 8421879-8422067 Caenorhabditis elegans
Exon21944   144   I: 8422116-8422259 Caenorhabditis elegans
Exon21946   150   I: 8422658-8422807 Caenorhabditis elegans
Exon21947   93   I: 8422854-8422946 Caenorhabditis elegans
Exon21950   262   I: 8422996-8423257 Caenorhabditis elegans
Exon21952   114   I: 8423540-8423653 Caenorhabditis elegans
Exon21954   399   I: 8423702-8424100 Caenorhabditis elegans
Exon21956   129   I: 8424159-8424287 Caenorhabditis elegans
Exon21958   222   I: 8424485-8424706 Caenorhabditis elegans
Exon21959   291   I: 8424749-8425039 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02E9.4b.1 8416831 8425039 1

1 Sequence

Length
4699

1 Sequence Ontology Term

Identifier Name Description
transcript