WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y15E3A.1b.1 Sequence Name  Y15E3A.1b.1
Length (nt)  1502   Chromosome Location  X: 15312663-15314898
Chromosome . Primary Identifier  X Chromosome Location . Start  15312663
Chromosome Location . End  15314898 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y15E3A.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003681 nhr-91 Y15E3A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y15E3A.1b Y15E3A.1b 933   X: 15312867-15312879

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y15E3A.1b.1 15312663 15314898 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262145   96   X: 15312663-15312758 Caenorhabditis elegans
Exon262150   53   X: 15312827-15312879 Caenorhabditis elegans
Exon262155   158   X: 15312931-15313088 Caenorhabditis elegans
Exon262161   404   X: 15313365-15313768 Caenorhabditis elegans
Exon262167   252   X: 15313817-15314068 Caenorhabditis elegans
Exon262173   539   X: 15314360-15314898 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y15E3A.1b.1 15312663 15314898 1

1 Sequence

Length
1502

1 Sequence Ontology Term

Identifier Name Description
transcript