WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y15E3A.2.1 Sequence Name  Y15E3A.2.1
Length (nt)  792   Chromosome Location  X: 15314874-15317246
Chromosome . Primary Identifier  X Chromosome Location . Start  15314874
Chromosome Location . End  15317246 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y15E3A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012441 glb-28 Y15E3A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y15E3A.2 Y15E3A.2 654   X: 15314984-15315014

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y15E3A.2.1 15314874 15317246 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262176   141   X: 15314874-15315014 Caenorhabditis elegans
Exon262177   192   X: 15315065-15315256 Caenorhabditis elegans
Exon262178   234   X: 15315384-15315617 Caenorhabditis elegans
Exon262179   131   X: 15316249-15316379 Caenorhabditis elegans
Exon262180   94   X: 15317153-15317246 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y15E3A.2.1 15314874 15317246 -1

1 Sequence

Length
792

1 Sequence Ontology Term

Identifier Name Description
transcript