WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y15E3A.3.1 Sequence Name  Y15E3A.3.1
Length (nt)  1641   Chromosome Location  X: 15322093-15325809
Chromosome . Primary Identifier  X Chromosome Location . Start  15322093
Chromosome Location . End  15325809 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y15E3A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012442 Y15E3A.3 Y15E3A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y15E3A.3 Y15E3A.3 1485   X: 15322249-15322359

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y15E3A.3.1 15322093 15325809 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262181   267   X: 15322093-15322359 Caenorhabditis elegans
Exon262182   117   X: 15322407-15322523 Caenorhabditis elegans
Exon262183   100   X: 15322946-15323045 Caenorhabditis elegans
Exon262184   90   X: 15323108-15323197 Caenorhabditis elegans
Exon262185   139   X: 15323254-15323392 Caenorhabditis elegans
Exon262186   212   X: 15324138-15324349 Caenorhabditis elegans
Exon262187   125   X: 15324401-15324525 Caenorhabditis elegans
Exon262188   156   X: 15324581-15324736 Caenorhabditis elegans
Exon262189   83   X: 15324796-15324878 Caenorhabditis elegans
Exon262190   112   X: 15324922-15325033 Caenorhabditis elegans
Exon262191   173   X: 15325247-15325419 Caenorhabditis elegans
Exon262192   67   X: 15325743-15325809 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y15E3A.3.1 15322093 15325809 -1

1 Sequence

Length
1641

1 Sequence Ontology Term

Identifier Name Description
transcript