WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10D11.1.1 Sequence Name  F10D11.1.1
Length (nt)  802   Chromosome Location  I: 8434550-8435807
Chromosome . Primary Identifier  I Chromosome Location . Start  8434550
Chromosome Location . End  8435807 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10D11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004931 sod-2 F10D11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10D11.1 F10D11.1 666   I: 8434556-8434608

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10D11.1.1 8434550 8435807 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22048   59   I: 8434550-8434608 Caenorhabditis elegans
Exon22049   173   I: 8434742-8434914 Caenorhabditis elegans
Exon22050   137   I: 8434962-8435098 Caenorhabditis elegans
Exon22051   252   I: 8435324-8435575 Caenorhabditis elegans
Exon22052   181   I: 8435627-8435807 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10D11.1.1 8434550 8435807 1

1 Sequence

Length
802

1 Sequence Ontology Term

Identifier Name Description
transcript