WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33A11.1.1 Sequence Name  C33A11.1.1
Length (nt)  2470   Chromosome Location  X: 15355238-15363861
Chromosome . Primary Identifier  X Chromosome Location . Start  15355238
Chromosome Location . End  15363861 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33A11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007877 nfki-1 C33A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33A11.1 C33A11.1 1836   X: 15355240-15355374

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33A11.1.1 15355238 15363861 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262213   137   X: 15355238-15355374 Caenorhabditis elegans
Exon262214   153   X: 15355427-15355579 Caenorhabditis elegans
Exon262215   220   X: 15355817-15356036 Caenorhabditis elegans
Exon262216   121   X: 15357339-15357459 Caenorhabditis elegans
Exon262217   125   X: 15357611-15357735 Caenorhabditis elegans
Exon262218   199   X: 15359184-15359382 Caenorhabditis elegans
Exon262220   139   X: 15361020-15361158 Caenorhabditis elegans
Exon262221   204   X: 15361229-15361432 Caenorhabditis elegans
Exon262222   114   X: 15361479-15361592 Caenorhabditis elegans
Exon262223   174   X: 15362701-15362874 Caenorhabditis elegans
Exon262224   66   X: 15362923-15362988 Caenorhabditis elegans
Exon262225   818   X: 15363044-15363861 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33A11.1.1 15355238 15363861 1

1 Sequence

Length
2470

1 Sequence Ontology Term

Identifier Name Description
transcript