WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1081.7.1 Sequence Name  D1081.7.1
Length (nt)  2883   Chromosome Location  I: 8487618-8490938
Chromosome . Primary Identifier  I Chromosome Location . Start  8487618
Chromosome Location . End  8490938 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1081.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008385 lotr-1 D1081.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1081.7 D1081.7 2568   I: 8487643-8487711

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1081.7.1 8487618 8490938 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22180   94   I: 8487618-8487711 Caenorhabditis elegans
Exon22181   134   I: 8487758-8487891 Caenorhabditis elegans
Exon22182   315   I: 8487937-8488251 Caenorhabditis elegans
Exon22183   204   I: 8488297-8488500 Caenorhabditis elegans
Exon22184   176   I: 8488570-8488745 Caenorhabditis elegans
Exon22185   73   I: 8488792-8488864 Caenorhabditis elegans
Exon22186   248   I: 8488917-8489164 Caenorhabditis elegans
Exon22187   839   I: 8489211-8490049 Caenorhabditis elegans
Exon22188   250   I: 8490095-8490344 Caenorhabditis elegans
Exon22189   550   I: 8490389-8490938 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1081.7.1 8487618 8490938 1

1 Sequence

Length
2883

1 Sequence Ontology Term

Identifier Name Description
transcript