WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03A10.3.1 Sequence Name  R03A10.3.1
Length (nt)  2149   Chromosome Location  X: 15435665-15440794
Chromosome . Primary Identifier  X Chromosome Location . Start  15435665
Chromosome Location . End  15440794 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03A10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010983 mocs-1 R03A10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03A10.3 R03A10.3 2130   X: 15435684-15435773

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03A10.3.1 15435665 15440794 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262420   109   X: 15435665-15435773 Caenorhabditis elegans
Exon262421   108   X: 15435913-15436020 Caenorhabditis elegans
Exon262422   116   X: 15436083-15436198 Caenorhabditis elegans
Exon262423   173   X: 15437134-15437306 Caenorhabditis elegans
Exon262424   225   X: 15437355-15437579 Caenorhabditis elegans
Exon262425   254   X: 15437628-15437881 Caenorhabditis elegans
Exon262426   320   X: 15438446-15438765 Caenorhabditis elegans
Exon262427   174   X: 15439364-15439537 Caenorhabditis elegans
Exon262428   144   X: 15439583-15439726 Caenorhabditis elegans
Exon262429   148   X: 15439772-15439919 Caenorhabditis elegans
Exon262430   223   X: 15439968-15440190 Caenorhabditis elegans
Exon262431   155   X: 15440640-15440794 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03A10.3.1 15435665 15440794 -1

1 Sequence

Length
2149

1 Sequence Ontology Term

Identifier Name Description
transcript