WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03A10.6.1 Sequence Name  R03A10.6.1
Length (nt)  1877   Chromosome Location  X: 15466300-15470802
Chromosome . Primary Identifier  X Chromosome Location . Start  15466300
Chromosome Location . End  15470802 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03A10.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010986 sprr-1 R03A10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03A10.6 R03A10.6 1584   X: 15466347-15466412

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03A10.6.1 15466300 15470802 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262454   113   X: 15466300-15466412 Caenorhabditis elegans
Exon262455   211   X: 15466712-15466922 Caenorhabditis elegans
Exon262456   194   X: 15467604-15467797 Caenorhabditis elegans
Exon262457   100   X: 15467856-15467955 Caenorhabditis elegans
Exon262458   344   X: 15468000-15468343 Caenorhabditis elegans
Exon262459   146   X: 15468392-15468537 Caenorhabditis elegans
Exon262460   186   X: 15469015-15469200 Caenorhabditis elegans
Exon262461   76   X: 15469249-15469324 Caenorhabditis elegans
Exon262462   121   X: 15469873-15469993 Caenorhabditis elegans
Exon262463   386   X: 15470417-15470802 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03A10.6.1 15466300 15470802 1

1 Sequence

Length
1877

1 Sequence Ontology Term

Identifier Name Description
transcript