WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H13N06.5.1 Sequence Name  H13N06.5.1
Length (nt)  1571   Chromosome Location  X: 15506037-15507880
Chromosome . Primary Identifier  X Chromosome Location . Start  15506037
Chromosome Location . End  15507880 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H13N06.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006494 zipt-7.2 H13N06.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H13N06.5 H13N06.5 1389   X: 15506203-15506834

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H13N06.5.1 15506037 15507880 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262571   798   X: 15506037-15506834 Caenorhabditis elegans
Exon262572   371   X: 15506907-15507277 Caenorhabditis elegans
Exon262573   78   X: 15507324-15507401 Caenorhabditis elegans
Exon262574   115   X: 15507452-15507566 Caenorhabditis elegans
Exon262575   209   X: 15507672-15507880 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H13N06.5.1 15506037 15507880 -1

1 Sequence

Length
1571

1 Sequence Ontology Term

Identifier Name Description
transcript