WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H30A04.1b.1 Sequence Name  H30A04.1b.1
Length (nt)  3272   Chromosome Location  X: 15516653-15524030
Chromosome . Primary Identifier  X Chromosome Location . Start  15516653
Chromosome Location . End  15524030 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H30A04.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001148 eat-20 H30A04.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H30A04.1b H30A04.1b 2433   X: 15516757-15516790

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H30A04.1b.1 15516653 15524030 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262611   138   X: 15516653-15516790 Caenorhabditis elegans
Exon262617   136   X: 15516852-15516987 Caenorhabditis elegans
Exon262621   86   X: 15517238-15517323 Caenorhabditis elegans
Exon262625   153   X: 15517381-15517533 Caenorhabditis elegans
Exon262629   150   X: 15517886-15518035 Caenorhabditis elegans
Exon262634   53   X: 15518360-15518412 Caenorhabditis elegans
Exon262638   270   X: 15518833-15519102 Caenorhabditis elegans
Exon262642   143   X: 15519252-15519394 Caenorhabditis elegans
Exon262648   128   X: 15520950-15521077 Caenorhabditis elegans
Exon262652   123   X: 15521137-15521259 Caenorhabditis elegans
Exon262656   99   X: 15521512-15521610 Caenorhabditis elegans
Exon262660   756   X: 15521663-15522418 Caenorhabditis elegans
Exon262662   138   X: 15522926-15523063 Caenorhabditis elegans
Exon262669   899   X: 15523132-15524030 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H30A04.1b.1 15516653 15524030 1

1 Sequence

Length
3272

1 Sequence Ontology Term

Identifier Name Description
transcript