WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02C6.2b.1 Sequence Name  C02C6.2b.1
Length (nt)  2402   Chromosome Location  X: 15543006-15546702
Chromosome . Primary Identifier  X Chromosome Location . Start  15543006
Chromosome Location . End  15546702 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02C6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007260 olrn-1 C02C6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02C6.2b C02C6.2b 1665   X: 15543067-15543104

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02C6.2b.1 15543006 15546702 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262649   99   X: 15543006-15543104 Caenorhabditis elegans
Exon262651   340   X: 15543198-15543537 Caenorhabditis elegans
Exon262653   779   X: 15543595-15544373 Caenorhabditis elegans
Exon262655   99   X: 15544430-15544528 Caenorhabditis elegans
Exon262657   151   X: 15544588-15544738 Caenorhabditis elegans
Exon262659   168   X: 15545245-15545412 Caenorhabditis elegans
Exon262660   766   X: 15545937-15546702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02C6.2b.1 15543006 15546702 1

1 Sequence

Length
2402

1 Sequence Ontology Term

Identifier Name Description
transcript