WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09A9.6a.1 Sequence Name  K09A9.6a.1
Length (nt)  3096   Chromosome Location  X: 15577242-15586811
Chromosome . Primary Identifier  X Chromosome Location . Start  15577242
Chromosome Location . End  15586811 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09A9.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010703 K09A9.6 K09A9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09A9.6a K09A9.6a 2619   X: 15577656-15577707

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09A9.6a.1 15577242 15586811 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262710   466   X: 15577242-15577707 Caenorhabditis elegans
Exon262714   68   X: 15580803-15580870 Caenorhabditis elegans
Exon262716   100   X: 15580956-15581055 Caenorhabditis elegans
Exon262718   91   X: 15581105-15581195 Caenorhabditis elegans
Exon262720   104   X: 15581295-15581398 Caenorhabditis elegans
Exon262722   95   X: 15581448-15581542 Caenorhabditis elegans
Exon262724   645   X: 15582194-15582838 Caenorhabditis elegans
Exon262726   140   X: 15582886-15583025 Caenorhabditis elegans
Exon262728   97   X: 15583990-15584086 Caenorhabditis elegans
Exon262730   197   X: 15584646-15584842 Caenorhabditis elegans
Exon262732   238   X: 15584894-15585131 Caenorhabditis elegans
Exon262734   501   X: 15585451-15585951 Caenorhabditis elegans
Exon262736   183   X: 15585997-15586179 Caenorhabditis elegans
Exon262739   171   X: 15586641-15586811 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09A9.6a.1 15577242 15586811 1

1 Sequence

Length
3096

1 Sequence Ontology Term

Identifier Name Description
transcript