WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09A9.5.1 Sequence Name  K09A9.5.1
Length (nt)  1688   Chromosome Location  X: 15586786-15590397
Chromosome . Primary Identifier  X Chromosome Location . Start  15586786
Chromosome Location . End  15590397 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09A9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001520 gas-1 K09A9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09A9.5 K09A9.5 1449   X: 15587019-15587148

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09A9.5.1 15586786 15590397 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262740   363   X: 15586786-15587148 Caenorhabditis elegans
Exon262744   646   X: 15588701-15589346 Caenorhabditis elegans
Exon262745   223   X: 15589395-15589617 Caenorhabditis elegans
Exon262746   175   X: 15589838-15590012 Caenorhabditis elegans
Exon262747   134   X: 15590066-15590199 Caenorhabditis elegans
Exon262748   147   X: 15590251-15590397 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09A9.5.1 15586786 15590397 -1

1 Sequence

Length
1688

1 Sequence Ontology Term

Identifier Name Description
transcript