WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43G9.6a.1 Sequence Name  F43G9.6a.1
Length (nt)  6267   Chromosome Location  I: 8623012-8631202
Chromosome . Primary Identifier  I Chromosome Location . Start  8623012
Chromosome Location . End  8631202 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43G9.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001414 fer-1 F43G9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43G9.6a F43G9.6a 6105   I: 8623156-8623365

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43G9.6a.1 8623012 8631202 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22638   354   I: 8623012-8623365 Caenorhabditis elegans
Exon22640   249   I: 8623414-8623662 Caenorhabditis elegans
Exon22642   182   I: 8623711-8623892 Caenorhabditis elegans
Exon22644   221   I: 8623940-8624160 Caenorhabditis elegans
Exon22646   197   I: 8624265-8624461 Caenorhabditis elegans
Exon22648   391   I: 8624531-8624921 Caenorhabditis elegans
Exon22650   750   I: 8624972-8625721 Caenorhabditis elegans
Exon22652   182   I: 8625863-8626044 Caenorhabditis elegans
Exon22654   264   I: 8626092-8626355 Caenorhabditis elegans
Exon22656   604   I: 8626402-8627005 Caenorhabditis elegans
Exon22658   98   I: 8627053-8627150 Caenorhabditis elegans
Exon22660   639   I: 8627288-8627926 Caenorhabditis elegans
Exon22662   385   I: 8627978-8628362 Caenorhabditis elegans
Exon22664   422   I: 8628406-8628827 Caenorhabditis elegans
Exon22667   112   I: 8629090-8629201 Caenorhabditis elegans
Exon22669   209   I: 8629248-8629456 Caenorhabditis elegans
Exon22671   216   I: 8629585-8629800 Caenorhabditis elegans
Exon22674   285   I: 8629847-8630131 Caenorhabditis elegans
Exon22677   294   I: 8630231-8630524 Caenorhabditis elegans
Exon22678   126   I: 8630943-8631068 Caenorhabditis elegans
Exon22679   87   I: 8631116-8631202 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43G9.6a.1 8623012 8631202 -1

1 Sequence

Length
6267

1 Sequence Ontology Term

Identifier Name Description
transcript