WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:K09E9.1b.1 Sequence Name  K09E9.1b.1
Length (nt)  1557   Chromosome Location  X: 15620540-15626281
Chromosome . Primary Identifier  X Chromosome Location . Start  15620540
Chromosome Location . End  15626281 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09E9.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010724 K09E9.1 K09E9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09E9.1b K09E9.1b 1557   X: 15620540-15620568

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09E9.1b.1 15620540 15626281 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262818   29   X: 15620540-15620568 Caenorhabditis elegans
Exon262820   132   X: 15622335-15622466 Caenorhabditis elegans
Exon262824   94   X: 15623069-15623162 Caenorhabditis elegans
Exon262828   217   X: 15623211-15623427 Caenorhabditis elegans
Exon262832   206   X: 15623572-15623777 Caenorhabditis elegans
Exon262836   93   X: 15624388-15624480 Caenorhabditis elegans
Exon262840   206   X: 15624657-15624862 Caenorhabditis elegans
Exon262844   252   X: 15624912-15625163 Caenorhabditis elegans
Exon262848   190   X: 15625226-15625415 Caenorhabditis elegans
Exon262852   69   X: 15626099-15626167 Caenorhabditis elegans
Exon262854   69   X: 15626213-15626281 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09E9.1b.1 15620540 15626281 1

1 Sequence

Length
1557

1 Sequence Ontology Term

Identifier Name Description
transcript