WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03H12.1d.1 Sequence Name  C03H12.1d.1
Length (nt)  2311   Chromosome Location  X: 15689449-15696427
Chromosome . Primary Identifier  X Chromosome Location . Start  15689449
Chromosome Location . End  15696427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03H12.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007284 C03H12.1 C03H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03H12.1d C03H12.1d 2109   X: 15689515-15689593

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C03H12.1d.1 15689449 15696427 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262925   145   X: 15689449-15689593 Caenorhabditis elegans
Exon262929   78   X: 15689686-15689763 Caenorhabditis elegans
Exon262932   154   X: 15690171-15690324 Caenorhabditis elegans
Exon262937   117   X: 15691008-15691124 Caenorhabditis elegans
Exon262943   109   X: 15691171-15691279 Caenorhabditis elegans
Exon262949   158   X: 15691534-15691691 Caenorhabditis elegans
Exon262954   182   X: 15691738-15691919 Caenorhabditis elegans
Exon262960   210   X: 15691973-15692182 Caenorhabditis elegans
Exon262966   227   X: 15692245-15692471 Caenorhabditis elegans
Exon262973   78   X: 15692732-15692809 Caenorhabditis elegans
Exon262984   68   X: 15694388-15694455 Caenorhabditis elegans
Exon262993   184   X: 15694506-15694689 Caenorhabditis elegans
Exon263002   119   X: 15694739-15694857 Caenorhabditis elegans
Exon263011   81   X: 15694904-15694984 Caenorhabditis elegans
Exon263023   213   X: 15695832-15696044 Caenorhabditis elegans
Exon263037   188   X: 15696240-15696427 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C03H12.1d.1 15689449 15696427 1

1 Sequence

Length
2311

1 Sequence Ontology Term

Identifier Name Description
transcript