WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03H12.1a.1 Sequence Name  C03H12.1a.1
Length (nt)  2388   Chromosome Location  X: 15689458-15696426
Chromosome . Primary Identifier  X Chromosome Location . Start  15689458
Chromosome Location . End  15696426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03H12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007284 C03H12.1 C03H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03H12.1a C03H12.1a 2196   X: 15689515-15689593

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C03H12.1a.1 15689458 15696426 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262926   136   X: 15689458-15689593 Caenorhabditis elegans
Exon262928   78   X: 15689686-15689763 Caenorhabditis elegans
Exon262931   154   X: 15690171-15690324 Caenorhabditis elegans
Exon262935   117   X: 15691008-15691124 Caenorhabditis elegans
Exon262941   109   X: 15691171-15691279 Caenorhabditis elegans
Exon262947   158   X: 15691534-15691691 Caenorhabditis elegans
Exon262952   182   X: 15691738-15691919 Caenorhabditis elegans
Exon262958   210   X: 15691973-15692182 Caenorhabditis elegans
Exon262964   227   X: 15692245-15692471 Caenorhabditis elegans
Exon262971   78   X: 15692732-15692809 Caenorhabditis elegans
Exon262982   68   X: 15694388-15694455 Caenorhabditis elegans
Exon262990   184   X: 15694506-15694689 Caenorhabditis elegans
Exon262999   119   X: 15694739-15694857 Caenorhabditis elegans
Exon263008   81   X: 15694904-15694984 Caenorhabditis elegans
Exon263017   87   X: 15695060-15695146 Caenorhabditis elegans
Exon263020   213   X: 15695832-15696044 Caenorhabditis elegans
Exon263033   187   X: 15696240-15696426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C03H12.1a.1 15689458 15696426 1

1 Sequence

Length
2388

1 Sequence Ontology Term

Identifier Name Description
transcript