WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03H12.1e.2 Sequence Name  C03H12.1e.2
Length (nt)  2118   Chromosome Location  X: 15690140-15696426
Chromosome . Primary Identifier  X Chromosome Location . Start  15690140
Chromosome Location . End  15696426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03H12.1e.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007284 C03H12.1 C03H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03H12.1e C03H12.1e 1827   X: 15690296-15690324

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03H12.1e.2 15690140 15696426 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262930   185   X: 15690140-15690324 Caenorhabditis elegans
Exon262939   117   X: 15691008-15691124 Caenorhabditis elegans
Exon262945   109   X: 15691171-15691279 Caenorhabditis elegans
Exon262951   158   X: 15691534-15691691 Caenorhabditis elegans
Exon262956   182   X: 15691738-15691919 Caenorhabditis elegans
Exon262962   210   X: 15691973-15692182 Caenorhabditis elegans
Exon262968   227   X: 15692245-15692471 Caenorhabditis elegans
Exon262975   78   X: 15692732-15692809 Caenorhabditis elegans
Exon262986   68   X: 15694388-15694455 Caenorhabditis elegans
Exon262995   184   X: 15694506-15694689 Caenorhabditis elegans
Exon263004   119   X: 15694739-15694857 Caenorhabditis elegans
Exon263013   81   X: 15694904-15694984 Caenorhabditis elegans
Exon263025   213   X: 15695832-15696044 Caenorhabditis elegans
Exon263035   187   X: 15696240-15696426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03H12.1e.2 15690140 15696426 1

1 Sequence

Length
2118

1 Sequence Ontology Term

Identifier Name Description
transcript