WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03H12.1f.1 Sequence Name  C03H12.1f.1
Length (nt)  2042   Chromosome Location  X: 15691020-15696293
Chromosome . Primary Identifier  X Chromosome Location . Start  15691020
Chromosome Location . End  15696293 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03H12.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007284 C03H12.1 C03H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03H12.1f C03H12.1f 711   X: 15694394-15694455

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03H12.1f.1 15691020 15696293 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262940   105   X: 15691020-15691124 Caenorhabditis elegans
Exon262946   521   X: 15691171-15691691 Caenorhabditis elegans
Exon262957   182   X: 15691738-15691919 Caenorhabditis elegans
Exon262963   210   X: 15691973-15692182 Caenorhabditis elegans
Exon262969   227   X: 15692245-15692471 Caenorhabditis elegans
Exon262976   78   X: 15692732-15692809 Caenorhabditis elegans
Exon262987   68   X: 15694388-15694455 Caenorhabditis elegans
Exon262996   184   X: 15694506-15694689 Caenorhabditis elegans
Exon263005   119   X: 15694739-15694857 Caenorhabditis elegans
Exon263014   81   X: 15694904-15694984 Caenorhabditis elegans
Exon263026   213   X: 15695832-15696044 Caenorhabditis elegans
Exon263031   54   X: 15696240-15696293 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03H12.1f.1 15691020 15696293 1

1 Sequence

Length
2042

1 Sequence Ontology Term

Identifier Name Description
transcript