WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39H11.3.1 Sequence Name  F39H11.3.1
Length (nt)  2010   Chromosome Location  I: 8702466-8705825
Chromosome . Primary Identifier  I Chromosome Location . Start  8702466
Chromosome Location . End  8705825 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000409 cdk-8 F39H11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39H11.3 F39H11.3 1767   I: 8702562-8702566

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39H11.3.1 8702466 8705825 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22918   101   I: 8702466-8702566 Caenorhabditis elegans
Exon22919   240   I: 8702616-8702855 Caenorhabditis elegans
Exon22920   188   I: 8702980-8703167 Caenorhabditis elegans
Exon22921   97   I: 8703219-8703315 Caenorhabditis elegans
Exon22922   136   I: 8703365-8703500 Caenorhabditis elegans
Exon22923   122   I: 8703547-8703668 Caenorhabditis elegans
Exon22924   99   I: 8703719-8703817 Caenorhabditis elegans
Exon22925   160   I: 8704199-8704358 Caenorhabditis elegans
Exon22926   84   I: 8704407-8704490 Caenorhabditis elegans
Exon22927   216   I: 8704545-8704760 Caenorhabditis elegans
Exon22928   96   I: 8704809-8704904 Caenorhabditis elegans
Exon22929   471   I: 8705355-8705825 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39H11.3.1 8702466 8705825 1

1 Sequence

Length
2010

1 Sequence Ontology Term

Identifier Name Description
transcript