WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36B1.1b.1 Sequence Name  C36B1.1b.1
Length (nt)  2743   Chromosome Location  I: 8705670-8719456
Chromosome . Primary Identifier  I Chromosome Location . Start  8705670
Chromosome Location . End  8719456 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36B1.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000527 cle-1 C36B1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36B1.1b C36B1.1b 2337   I: 8705986-8706054

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.1b.1 8705670 8719456 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22932   385   I: 8705670-8706054 Caenorhabditis elegans
Exon22935   104   I: 8706166-8706269 Caenorhabditis elegans
Exon22939   83   I: 8706319-8706401 Caenorhabditis elegans
Exon22943   305   I: 8707074-8707378 Caenorhabditis elegans
Exon22947   132   I: 8707428-8707559 Caenorhabditis elegans
Exon22951   191   I: 8708229-8708419 Caenorhabditis elegans
Exon22955   609   I: 8708795-8709403 Caenorhabditis elegans
Exon22960   133   I: 8709925-8710057 Caenorhabditis elegans
Exon22965   69   I: 8710541-8710609 Caenorhabditis elegans
Exon22969   87   I: 8713969-8714055 Caenorhabditis elegans
Exon22972   158   I: 8714304-8714461 Caenorhabditis elegans
Exon22975   74   I: 8714517-8714590 Caenorhabditis elegans
Exon22978   98   I: 8714641-8714738 Caenorhabditis elegans
Exon22981   110   I: 8714793-8714902 Caenorhabditis elegans
Exon22983   205   I: 8719252-8719456 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.1b.1 8705670 8719456 -1

1 Sequence

Length
2743

1 Sequence Ontology Term

Identifier Name Description
transcript