WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36B1.8a.1 Sequence Name  C36B1.8a.1
Length (nt)  3748   Chromosome Location  I: 8737072-8742545
Chromosome . Primary Identifier  I Chromosome Location . Start  8737072
Chromosome Location . End  8742545 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36B1.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007975 gls-1 C36B1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36B1.8a C36B1.8a 3150   I: 8737072-8737218

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.8a.1 8737072 8742545 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23035   147   I: 8737072-8737218 Caenorhabditis elegans
Exon23037   151   I: 8737268-8737418 Caenorhabditis elegans
Exon23040   188   I: 8738121-8738308 Caenorhabditis elegans
Exon23043   77   I: 8738407-8738483 Caenorhabditis elegans
Exon23046   94   I: 8738536-8738629 Caenorhabditis elegans
Exon23049   330   I: 8738677-8739006 Caenorhabditis elegans
Exon23052   320   I: 8739104-8739423 Caenorhabditis elegans
Exon23055   194   I: 8739472-8739665 Caenorhabditis elegans
Exon23058   239   I: 8739751-8739989 Caenorhabditis elegans
Exon23061   109   I: 8740038-8740146 Caenorhabditis elegans
Exon23064   237   I: 8740192-8740428 Caenorhabditis elegans
Exon23067   116   I: 8740559-8740674 Caenorhabditis elegans
Exon23070   193   I: 8740718-8740910 Caenorhabditis elegans
Exon23073   164   I: 8740961-8741124 Caenorhabditis elegans
Exon23078   171   I: 8741198-8741368 Caenorhabditis elegans
Exon23079   82   I: 8741416-8741497 Caenorhabditis elegans
Exon23082   195   I: 8741549-8741743 Caenorhabditis elegans
Exon23086   741   I: 8741805-8742545 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.8a.1 8737072 8742545 1

1 Sequence

Length
3748

1 Sequence Ontology Term

Identifier Name Description
transcript