WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y7A5A.1.1 Sequence Name  Y7A5A.1.1
Length (nt)  1705   Chromosome Location  X: 15767435-15771493
Chromosome . Primary Identifier  X Chromosome Location . Start  15767435
Chromosome Location . End  15771493 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y7A5A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012407 Y7A5A.1 Y7A5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y7A5A.1 Y7A5A.1 1617   X: 15767521-15767734

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y7A5A.1.1 15767435 15771493 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263186   300   X: 15767435-15767734 Caenorhabditis elegans
Exon263187   135   X: 15767914-15768048 Caenorhabditis elegans
Exon263188   407   X: 15768111-15768517 Caenorhabditis elegans
Exon263189   165   X: 15768927-15769091 Caenorhabditis elegans
Exon263190   289   X: 15769139-15769427 Caenorhabditis elegans
Exon263193   122   X: 15770470-15770591 Caenorhabditis elegans
Exon263194   192   X: 15770638-15770829 Caenorhabditis elegans
Exon263195   95   X: 15771399-15771493 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y7A5A.1.1 15767435 15771493 -1

1 Sequence

Length
1705

1 Sequence Ontology Term

Identifier Name Description
transcript