WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y7A5A.9.1 Sequence Name  Y7A5A.9.1
Length (nt)  225   Chromosome Location  X: 15827166-15827844
Chromosome . Primary Identifier  X Chromosome Location . Start  15827166
Chromosome Location . End  15827844 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y7A5A.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012415 Y7A5A.9 Y7A5A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y7A5A.9 Y7A5A.9 141   X: 15827227-15827243

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y7A5A.9.1 15827166 15827844 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263257   78   X: 15827166-15827243 Caenorhabditis elegans
Exon263258   114   X: 15827656-15827769 Caenorhabditis elegans
Exon263259   33   X: 15827812-15827844 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y7A5A.9.1 15827166 15827844 1

1 Sequence

Length
225

1 Sequence Ontology Term

Identifier Name Description
transcript